E-M34 data

From Haplowiki

E-M34 data.

Procedure...

The modal of all 84 SNP confirmed E-M34 on the E-M35 Project's database, for the core YHRD markers, was determined to be as follows:-

19	389i	389ii	390	391	392	393	385	438	439
13	13	30	25	9	11	14	17,18	10	12

6 matches for the above haplotype were found out of 70259 haplotypes in that database. All 6 were in the 35515 European haplotypes in YHRD, 4 of which were defined as being Eastern European.

One step mutation neighbours were also examined:-

19	389i	389ii	390	391	392	393	385	n	'	'
13	13	31	25	9	11	14	17,18	5	>>	the most common one-step neighbour in turn being our original modal search
13	13	30	25	9	11	14	16,18	4	>>	the most common one-step neighbour in turn being our original modal search
13	13	29	25	9	11	14	17,18	2	>>	the most common one-step neighbour in turn being our original modal search
13	14	31	25	9	11	14	17,18	1	>>	the most common one-step neighbour in turn being our original modal search
13	13	30	24	9	11	14	17,18	1	>>	the most common one-step neighbour in turn being our original modal search
13	13	30	26	9	11	14	17,18	1	>>	the most common one-step neighbour in turn being our original modal search
13	13	30	25	10	11	14	17,18	1	>>	the most common one-step neighbour in turn being DYS393=13
13	13	30	25	9	11	14	17,17	1	>>	the most common one-step neighbour in turn being our original modal search
13	13	30	25	9	11	14	17,19	1	>>	the most common one-step neighbour in turn being our original modal search
12	13	30	25	9	11	14	17,18	0	>>
14	13	30	25	9	11	14	17,18	0	>>
13	12	29	25	9	11	14	17,18	0	>>
13	13	30	25	8	11	14	17,18	0	>>
13	13	30	25	9	10	14	17,18	0	>>
13	13	30	25	9	12	14	17,18	0	>>
13	13	30	25	9	11	13	17,18	0	>>
13	13	30	25	9	11	15	17,18	0	>>
13	13	30	25	9	11	14	18,18	0	>>

Then both the modal and the above one step neighbours were checked more closely for the points of origin:-

n of N	Geoposition [Population]	Metapopulation
Modal
1 of 49	Hradec Kralove, Czech Republic [Czech]	Eurasian - European - Eastern European
1 of 645	Prague, Czech Republic [Czech]	Eurasian - European - Eastern European
1 of 43	Tver, Russian Federation [Russian]	Eurasian - European - Eastern European
1 of 22	Florida, United States [European American]	Eurasian - European
1 of 942	Gdansk, Poland [Polish]	Eurasian - European - Eastern European
1 of 653	Buenos Aires, Argentina [European]	Eurasian - European
Variant 1
1 of 114	Cape Town, South Africa [Mixed Ancestry]	Admixed
1 of 45	Liberec, Czech Republic [Czech]	Eurasian - European - Eastern European
1 of 105	Szczecin, Poland [Polish]	Eurasian - European - Eastern European
1 of 811	Leipzig, Germany [German]	Eurasian - European - Western European
1 of 37	Belgorod, Russian Federation [Russian]	Eurasian - European - Eastern European
Variant 2	Geoposition [Population]	Metapopulation
2 of 190	Hungary [Hungarian]	Eurasian - European - South-Eastern European
1 of 125	Brussels, Belgium [Belgian]	Eurasian - European - Western European
1 of 109	Paris, France [French]	Eurasian - European - Western European
Variant 3	Geoposition [Population]	Metapopulation
1 of 95	Nariño, Colombia [Mestizo]	Admixed
1 of 123	Nicaragua [Mestizo]	Admixed
Variant 4	Geoposition [Population]	Metapopulation
1 of 100	Cape Town, South Africa [European-English]	Eurasian - European
Variant 5	Geoposition [Population]	Metapopulation
1 of 645	Prague, Czech Republic [Czech]	Eurasian - European - Eastern European
Variant 6	Geoposition [Population]	Metapopulation
1 of 190	Hungary [Hungarian]	Eurasian - European - South-Eastern European
Variant 7	Geoposition [Population]	Metapopulation
1 of 107	England-Wales, United Kingdom [Afro-Caribbean]	African - Afro-Caribbean
Variant 8	Geoposition [Population]	Metapopulation
1 of 104	Romania [Romanian]	Eurasian - European - South-Eastern European
Variant 9	Geoposition [Population]	Metapopulation
1 of 37	Budapest, Hungary [Ashkenazi Jews]	Eurasian - European - South-Eastern European